STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dennd2bSuppression of tumorigenicity 5. (1127 aa)    
Predicted Functional Partners:
ENSSPAP00000002516
Uncharacterized protein.
    
 0.733
ift27
Intraflagellar transport 27 homolog (Chlamydomonas).
    
 0.733
LOC103363946
Si:dkey-16l2.16.
    
 0.733
rab35
RAB35, member RAS oncogene family b.
    
 0.733
LOC103372379
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
   
 
  0.575
ENSSPAP00000012938
RAB9B, member RAS oncogene family.
     
 0.545
suox
Sulfite oxidase.
      
 0.522
LOC103371221
Intersectin 2b.
    
 
 0.439
ENSSPAP00000031427
Uncharacterized protein.
    
 
 0.439
ENSSPAP00000031428
Uncharacterized protein.
    
 
 0.439
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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