STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000027487Uncharacterized protein. (1273 aa)    
Predicted Functional Partners:
ush1c
Usher syndrome 1C.
   
 0.673
ENSSPAP00000004522
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
 
  
  0.643
LOC103376604
Uncharacterized protein.
    
 0.641
LOC103368462
Zgc:153867.
    
 0.641
LOC103374050
Myosin light chain, phosphorylatable, fast skeletal muscle b.
    
 0.640
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
    
 0.640
LOC103358995
Myosin, light chain 2a, regulatory, cardiac, slow.
    
 0.640
LOC103366907
Uncharacterized protein.
    
 0.640
ENSSPAP00000027507
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
 
      0.630
myl7
Myosin, light chain 7, regulatory.
    
 0.624
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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