STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctscCathepsin C; Belongs to the peptidase C1 family. (455 aa)    
Predicted Functional Partners:
ctsw
Cathepsin F; Belongs to the peptidase C1 family.
   
0.907
ctso
Cathepsin O; Belongs to the peptidase C1 family.
   
0.877
LOC103364983
Cathepsin Bb; Belongs to the peptidase C1 family.
   
0.875
ctsb
Cathepsin Ba; Belongs to the peptidase C1 family.
   
0.875
xiap
X-linked inhibitor of apoptosis.
     
 0.837
LOC103368463
Baculoviral IAP repeat containing 5b.
     
 0.836
LOC103374293
Baculoviral IAP repeat containing 5a.
     
 0.836
birc2
Baculoviral IAP repeat containing 2.
     
 0.834
bcl2l1
BCL2 like 1.
     
 0.830
LOC103365897
BH4_2 domain-containing protein.
     
 0.830
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.