STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000027671Uncharacterized protein. (108 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
    
 
 0.899
efhb
Uncharacterized protein.
   
   0.736
WDR1
WD repeat domain 1.
   
 
 0.663
ENSSPAP00000022781
Uncharacterized protein.
    
 
 0.655
ENSSPAP00000022849
PARK2 co-regulated.
    
 
 0.655
efhc2
EF-hand domain (C-terminal) containing 2.
    
 
 0.644
efhc1
EF-hand domain (C-terminal) containing 1.
    
 
 0.644
ENSSPAP00000011094
Calmodulin-like 4a.
   
 0.613
tuba4a
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.606
LOC103369428
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.606
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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