STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000027697Uncharacterized protein. (101 aa)    
Predicted Functional Partners:
YTHDC2
YTH domain containing 2.
    
 
 0.685
RAD21
RAD21 cohesin complex component.
     
 0.538
ENSSPAP00000020133
Rad21_Rec8_N domain-containing protein.
     
 0.538
LOC103353832
RAD21 cohesin complex component a.
     
 0.538
SYDE1
Synapse defective Rho GTPase homolog 1.
      
 0.527
ythdc1
YTH domain containing 1.
    
 
 0.519
ENSSPAP00000018165
RNA binding motif protein 46.
      
 0.489
LOC103355155
Uncharacterized protein.
    
 
 0.458
nepro
Nucleolus and neural progenitor protein.
      
 0.430
ENSSPAP00000021489
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.418
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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