STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
huwe1HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1. (4085 aa)    
Predicted Functional Partners:
LOC103369030
MCL1 apoptosis regulator, BCL2 family member b.
    
 
 0.958
UBB
Ubiquitin B.
   
 0.954
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.946
rps27a
Ribosomal protein S27a.
   
 0.931
LOC103362467
DNA-damage-inducible transcript 4.
    
   0.884
LOC103362470
DNA damage-inducible transcript 4 protein-like.
    
   0.884
trip12
Thyroid hormone receptor interactor 12.
   
 
0.840
ENSSPAP00000000794
Ubiquitin-like domain-containing protein.
    
 0.832
trrap
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.829
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.821
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (22%) [HD]