STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103365327Uncharacterized protein. (2746 aa)    
Predicted Functional Partners:
rac3
Rac family small GTPase 3b.
   
 0.786
rac2
Uncharacterized protein.
   
 0.786
RAC1
Rac family small GTPase 1.
   
 0.786
LOC103376111
Uncharacterized protein.
   
 0.786
ENSSPAP00000013389
Ras homolog gene family, member Gd.
   
 0.783
LOC103354640
Ras homolog family member Gb.
   
 0.783
LOC103372064
Cell division cycle 42.
   
 0.780
CDC42
Cell division cycle 42.
   
 0.780
LOC103356837
Uncharacterized protein.
   
 0.779
rhov
Ras homolog family member V.
   
 0.771
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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