STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mapre1Microtubule-associated protein, RP/EB family, member 1b. (258 aa)    
Predicted Functional Partners:
LOC103364794
Dynactin 1a.
    
 
 0.929
LOC103371536
Dynactin 1b.
    
 
 0.929
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.900
bub3
BUB3 mitotic checkpoint protein.
   
 0.866
mapre2
Microtubule-associated protein, RP/EB family, member 2.
  
 
  
0.852
mapre3
Microtubule-associated protein, RP/EB family, member 3b.
  
 
  
0.852
LOC103361391
Microtubule-associated protein, RP/EB family, member 3a.
  
 
  
0.851
ckap5
Cytoskeleton associated protein 5.
   
 
 0.835
LOC103374758
Uncharacterized protein.
   
 
 0.835
cdc20
Cell division cycle 20 homolog.
   
 0.823
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.