STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gria4Glutamate receptor, ionotropic, AMPA 4a. (774 aa)    
Predicted Functional Partners:
LOC103367200
Uncharacterized protein.
  
0.821
gria2
Glutamate receptor, ionotropic, AMPA 2b.
  
0.820
LOC103375238
Lig_chan-Glu_bd domain-containing protein.
   
0.818
grip1
Glutamate receptor interacting protein 1.
   
 0.817
LOC103358879
Cornichon family AMPA receptor auxiliary protein 3.
    
 0.806
cnih2
Cornichon family AMPA receptor auxiliary protein 2.
    
 0.806
cnih1
Cornichon family AMPA receptor auxiliary protein 1.
    
 0.802
cnih4
Cornichon family AMPA receptor auxiliary protein 4.
    
 0.801
pick1
Protein interacting with prkca 1.
    
 0.784
LOC103363669
Uncharacterized protein.
   
 0.749
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.