STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103354342Abl-interactor 1b. (491 aa)    
Predicted Functional Partners:
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
    
 0.989
cyfip1
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
   
 0.987
cyfip2
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
   
 0.982
nckap1
NCK-associated protein 1.
    
 0.974
nckap1l
NCK associated protein 1 like.
    
 0.969
LOC103353329
WASP family member 3a.
   
 0.948
ENSSPAP00000022456
Uncharacterized protein.
   
 0.948
LOC103375655
WASP family member 3b.
   
 0.948
LOC103363022
Zgc:109889.
   
 0.922
abl2
Tyrosine-protein kinase.
    
 0.905
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.