STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
osbpl11Oxysterol-binding protein; Belongs to the OSBP family. (719 aa)    
Predicted Functional Partners:
osbpl9
Oxysterol-binding protein; Belongs to the OSBP family.
    
  
0.882
gale
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.702
uxs1
UDP-glucuronate decarboxylase 1.
     
 0.671
ENSSPAP00000027029
Ras homolog family member H.
    
  0.664
LOC103370959
Ras homolog family member Q.
    
  0.664
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.649
uaca
Uveal autoantigen with coiled-coil domains and ankyrin repeats b.
    
  0.631
asb16
Ankyrin repeat and SOCS box containing 16.
    
 0.620
NPC1L1
NPC1 like intracellular cholesterol transporter 1.
   
 0.614
npc1
Niemann-Pick disease, type C1.
   
 0.614
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.