STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLDN20-2Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (240 aa)    
Predicted Functional Partners:
tjp1
Tight junction protein 1b; Belongs to the MAGUK family.
    
  0.858
LOC103370909
Tight junction protein 3; Belongs to the MAGUK family.
    
  0.858
LOC103357005
Tight junction protein 1a; Belongs to the MAGUK family.
    
  0.855
LOC103356951
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
  
  
 
0.838
CLDN20
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
  
  
 
0.832
LOC103353410
Tight junction protein 2a (zona occludens 2); Belongs to the MAGUK family.
    
  0.744
tjp2
Uncharacterized protein; Belongs to the MAGUK family.
    
  0.744
pex19
Peroxisomal biogenesis factor 19.
    
 0.561
pex11g
Peroxisomal biogenesis factor 11 gamma.
    
 0.505
pex11b
Peroxisomal biogenesis factor 11 beta.
    
 0.505
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.