STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103353788RRM domain-containing protein. (245 aa)    
Predicted Functional Partners:
SRSF3
Serine and arginine rich splicing factor 3b.
   
 0.939
ENSSPAP00000023710
RRM domain-containing protein.
   
 0.939
srsf9
Serine and arginine rich splicing factor 9.
   
0.937
LOC103365142
Uncharacterized protein.
  
0.935
LOC103362657
Serine and arginine rich splicing factor 1a.
   
 0.929
srsf7
Serine and arginine rich splicing factor 7b.
   
 0.925
ENSSPAP00000029545
Serine and arginine rich splicing factor 7a.
   
 0.925
LOC103363951
RRM domain-containing protein.
  
0.892
srsf2
RRM domain-containing protein.
  
0.892
LOC103365207
Scaffold attachment factor B.
  
 0.888
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.