STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103357064Synaptic vesicle glycoprotein 2Ca. (735 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
     
 0.864
LOC103363216
Malate synthase-like.
   
 
 0.858
lamc2
Laminin subunit gamma 2.
     
 0.843
ENSSPAP00000019126
Laminin N-terminal domain-containing protein.
     
 0.842
LOC103366621
Laminin, beta 1a.
     
 0.834
lamb2
Laminin, beta 2 (laminin S).
     
 0.834
pla2g4a
Phospholipase A2.
    
 0.833
LAMA2
Laminin subunit alpha 2.
     
 0.832
LOC103364103
Laminin, beta 1b.
     
 0.832
lamc1
Laminin, gamma 1.
     
 0.831
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.