STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rab22aRAB22A, member RAS oncogene family. (194 aa)    
Predicted Functional Partners:
rabgef1
Uncharacterized protein.
   
 0.971
LOC103366651
Uncharacterized protein.
   
 0.971
LOC103357827
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
 0.971
rbsn
Rabenosyn, RAB effector.
   
 0.914
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 
 0.906
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 
 0.906
RAB31
RAB31, member RAS oncogene family.
  
  
 
0.899
rabggta
Rab geranylgeranyltransferase subunit alpha.
    
 0.873
als2
Alsin Rho guanine nucleotide exchange factor ALS2 b.
    
 0.864
ENSSPAP00000010035
Uncharacterized protein.
    
 0.847
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.