STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000028453Uncharacterized protein. (285 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
    
  0.862
LOC103364319
Excision repair cross-complementation group 6.
   
  0.766
znf407
Zinc finger protein 407.
 
 
   
0.667
bard1
BRCA1 associated RING domain 1.
    
 0.616
ENSSPAP00000021089
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.607
YTHDC2
YTH domain containing 2.
   
  0.591
ercc6l2
Excision repair cross-complementation group 6-like 2.
   
  0.576
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.575
ranbp2
RAN binding protein 2.
   
   0.571
ep300
E1A binding protein p300 b.
   
  0.568
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.