STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103374438Zinc finger protein 207, b. (442 aa)    
Predicted Functional Partners:
bub3
BUB3 mitotic checkpoint protein.
   
 
 0.948
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
   0.931
sf3b1
Splicing factor 3b, subunit 1.
   
    0.748
SRSF3
Serine and arginine rich splicing factor 3b.
   
    0.717
ENSSPAP00000023710
RRM domain-containing protein.
   
    0.717
sf3a2
Splicing factor 3a, subunit 2.
   
 
 0.612
LOC103365454
Uncharacterized protein.
   
   0.577
ENSSPAP00000002380
RRM domain-containing protein.
   
   0.577
SRSF10
Serine and arginine rich splicing factor 10.
   
   0.577
LOC103375213
RRM domain-containing protein.
   
 
 0.566
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.