STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103358750Zinc finger protein 687b. (1364 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
    
  0.862
ints3
Integrator complex subunit 3.
   
   0.850
ints5
Integrator complex subunit 5.
   
   0.848
ints1
Integrator complex subunit 1.
    
   0.846
bard1
BRCA1 associated RING domain 1.
    
 0.616
LOC103358409
Embryonal Fyn-associated substrate.
  
 
  0.591
YTHDC2
YTH domain containing 2.
    
  0.579
gtf2e2
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
    
 0.568
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.564
sufu
Suppressor of fused homolog.
    
  0.553
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.