STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000028883Chondroitin sulfate proteoglycan 5b. (362 aa)    
Predicted Functional Partners:
ENSSPAP00000012700
Uncharacterized protein.
  
     0.496
LOC103364591
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
  
  
  0.462
chst10
Carbohydrate sulfotransferase.
  
  
  0.451
hepacam2
HEPACAM family member 2.
  
     0.423
frs2
Fibroblast growth factor receptor substrate 2b.
  
     0.413
golga1
Golgin A1.
  
     0.413
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.