STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hivep1Human immunodeficiency virus type I enhancer binding protein 1. (2440 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
    
  0.862
bard1
BRCA1 associated RING domain 1.
    
 0.616
YTHDC2
YTH domain containing 2.
    
  0.579
ankrd22
Ankyrin repeat domain 22.
    
 
 0.573
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.568
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.568
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.564
phf21a
PHD finger protein 21Ab.
  
  0.555
sufu
Suppressor of fused homolog.
    
  0.553
ENSSPAP00000004797
NDK domain-containing protein.
    
 0.553
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.