STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtx3Metaxin. (307 aa)    
Predicted Functional Partners:
samm50
Sorting and assembly machinery component 50 homolog, like.
   
 0.971
LOC103366387
SAMM50 sorting and assembly machinery component.
   
 0.971
mtx2
Metaxin 2.
    
0.917
tomm40
Translocase of outer mitochondrial membrane 40 homolog (yeast).
   
 0.912
TOMM40L
Translocase of outer mitochondrial membrane 40 like.
   
 0.912
LOC103360127
Translocase of outer mitochondrial membrane 40 homolog, like.
   
 0.912
tomm22
Translocase of outer mitochondrial membrane 22 homolog (yeast).
    
 0.849
LOC103355718
PVR cell adhesion molecule related 2 like.
   
 0.849
LOC103370823
Si:ch73-22o12.1.
   
 0.849
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 0.827
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.