STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
samd4bSterile alpha motif domain containing 4B. (671 aa)    
Predicted Functional Partners:
LOC103365420
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
   0.530
LOC103354810
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
   0.530
golga3
Golgin A3.
      
 0.501
LOC103363916
Nanos homolog 1; Belongs to the nanos family.
    
 
 0.493
NANOS1
Nanos C2HC-type zinc finger 1; Belongs to the nanos family.
    
 
 0.493
ENSSPAP00000004810
Nanos-type domain-containing protein; Belongs to the nanos family.
    
 
 0.481
rnpc3
RNA-binding region (RNP1, RRM) containing 3.
      
 0.468
pum1
Pumilio RNA-binding family member 1.
    
 
 0.461
pum2
Pumilio RNA-binding family member 2.
    
 
 0.461
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
   
 
 0.457
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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