STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103364794Dynactin 1a. (1260 aa)    
Predicted Functional Partners:
dctn2
Dynactin 2 (p50).
   
 0.994
dctn3
Dynactin 3 (p22).
   
 0.991
actr10
Actin related protein 10; Belongs to the actin family.
    
 0.989
dctn4
Dynactin 4.
    
 0.989
LOC103372992
Actin related protein 1, centractin.
   
 0.986
dctn5
Dynactin 5.
    
 0.986
LOC103363884
Uncharacterized protein.
    
 0.975
DCTN6
Dynactin subunit 6.
    
 0.975
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.965
LOC103372819
Dynein, cytoplasmic 1, intermediate chain 2b.
    
 0.945
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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