STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103358756Uncharacterized protein. (379 aa)    
Predicted Functional Partners:
tfip11
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.
    
 
 0.656
zyx
Zyxin.
    
   0.588
tasp1
Taspase, threonine aspartase, 1.
      
 0.519
trappc2
Trafficking protein particle complex 2.
      
 0.489
igsf11
Immunoglobulin superfamily member 11.
      
 0.474
alox5ap
Arachidonate 5-lipoxygenase-activating protein.
      
 0.470
rabgap1
RAB GTPase activating protein 1.
    
 
 0.425
rabgap1l
Rab-GAP TBC domain-containing protein.
    
 
 0.425
LOC103364667
Uncharacterized protein.
    
 
 0.425
LOC103355118
Uncharacterized protein; Belongs to the peptidase S1 family.
      
 0.414
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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