STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frmd4aFERM domain containing 4A. (1072 aa)    
Predicted Functional Partners:
sav1
Salvador family WW domain containing protein 1.
    
 0.670
frmd1
FERM domain containing 1.
    
0.652
frmd6
FERM domain containing 6.
    
0.652
LOC103355560
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
 0.602
ENSSPAP00000009435
PDZ domain-containing protein.
    
 0.602
magi3
Uncharacterized protein.
    
 0.602
PLEKHA5
Pleckstrin homology domain containing A5.
    
 0.597
LOC103362557
PH domain-containing protein.
    
 0.597
LOC103356696
Cytohesin 4b.
    
 
 0.579
grasp
GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein.
    
 0.579
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.