STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103358760S100 calcium binding protein U; Belongs to the S-100 family. (244 aa)    
Predicted Functional Partners:
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.619
LOC103356514
EF-hand domain-containing protein.
    
 0.616
LOC103356515
Protein S100-G-like.
    
 0.616
birc6
Baculoviral IAP repeat containing 6.
   
 0.615
gak
Cyclin G associated kinase.
   
 0.609
pla2g4a
Phospholipase A2.
    
 0.600
traf7
TNF receptor-associated factor 7.
    
  0.595
acp5
Tartrate-resistant acid phosphatase type 5.
   
 0.583
ENSSPAP00000022824
S_100 domain-containing protein; Belongs to the S-100 family.
      
 0.575
ift81
Intraflagellar transport 81 homolog.
    
 0.568
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.