STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
efna1Ephrin-A1b; Belongs to the ephrin family. (234 aa)    
Predicted Functional Partners:
LOC103362618
Eph receptor A2 a.
   
 0.978
LOC103367283
Eph receptor A2 b.
   
 0.970
epha8
Uncharacterized protein.
   
 0.933
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.890
ntrk1
Tyrosine-protein kinase receptor.
    
 0.879
ENSSPAP00000023532
Macrophage stimulating 1 receptor b.
   
 0.876
LOC103360420
Macrophage stimulating 1 receptor a.
   
 0.876
mst1r
Macrophage stimulating 1 receptor b.
   
 0.876
ENSSPAP00000010441
Tyrosine-protein kinase receptor.
    
 0.871
LOC103364540
Tyrosine-protein kinase receptor.
    
 0.871
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.