STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nxnThioredoxin domain-containing protein. (418 aa)    
Predicted Functional Partners:
txn
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.597
LYPD6
LY6/PLAUR domain containing 6.
      
 0.504
ccdc92
Coiled-coil domain containing 92.
      
 0.493
cmtr1
Cap methyltransferase 1.
   
  
 0.483
ENSSPAP00000011587
Uncharacterized protein.
      
 0.478
bcl2l13
BCL2 like 13.
      
 0.469
dvl2
Dishevelled segment polarity protein 2.
    
 
 0.460
LOC103366747
Dishevelled segment polarity protein 3a.
    
 
 0.460
ENSSPAP00000017112
Uncharacterized protein.
    
 
 0.460
ENSSPAP00000017156
DIX domain-containing protein.
    
 
 0.460
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.