STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103371518Uncharacterized protein. (539 aa)    
Predicted Functional Partners:
PUF60
Poly-U binding splicing factor b.
   
 
 0.675
LOC103372164
Uncharacterized protein.
   
 
 0.675
LOC103366231
Poly(A)-specific ribonuclease (deadenylation nuclease).
   
 0.671
exosc2
Exosome component 2.
   
  0.641
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.599
LOC103376616
QKI, KH domain containing, RNA binding 2.
   
 
 0.592
LOC103376478
QKI, KH domain containing, RNA binding a.
   
 
 0.592
LOC103356033
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
  0.548
LOC103370571
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
  0.548
exosc3
Exosome component 3.
   
 
 0.548
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.