STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kcnn3Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3. (522 aa)    
Predicted Functional Partners:
kcnn4
Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4.
  
  
0.810
KCNMB4
Potassium calcium-activated channel subfamily M regulatory beta subunit 4.
     
 0.791
LOC103359698
Potassium large conductance calcium-activated channel, subfamily M, beta member 2.
     
 0.768
kcnj13
Potassium inwardly-rectifying channel, subfamily J, member 13.
   
 
 0.712
lipt2
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
     
 0.671
LOC103368405
Si:ch211-38m6.7.
     
 0.656
etv1
Ets variant 1.
   
  
 0.641
gabra1
Gamma-aminobutyric acid (GABA) A receptor, alpha 1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.609
LOC103372325
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 
 0.601
calm1
Calmodulin 1.
    
 
 0.601
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.