STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000029941Growth arrest-specific 1b. (261 aa)    
Predicted Functional Partners:
ptch1
Patched 1.
     
 0.925
ptch2
Patched 2.
     
 0.925
boc
BOC cell adhesion associated, oncogene regulated.
    
 0.925
cdon
Cell adhesion associated, oncogene regulated.
    
 0.925
ENSSPAP00000027058
Uncharacterized protein.
  
  
 
0.903
lrp2
Low density lipoprotein receptor-related protein 2a.
     
 0.902
ENSSPAP00000027952
Growth arrest-specific 1a.
  
  
 
0.901
dhh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.894
shh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.888
ENSSPAP00000007934
HintC domain-containing protein.
    
 0.888
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.