STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000029945Uncharacterized protein. (167 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.913
LOC103372083
Heme-binding protein soul4.
   
 0.840
pla2g4a
Phospholipase A2.
     
 0.826
rag2
Recombination activating gene 2.
   
 0.825
rpl21
Ribosomal protein L21.
   
   0.803
bard1
BRCA1 associated RING domain 1.
    
 0.780
babam1
BRISC and BRCA1 A complex member 1.
    
 0.770
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.736
rpl8
Ribosomal protein L8.
   
 
 0.720
ENSSPAP00000029682
Uncharacterized protein.
   
   0.719
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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