STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
leng1Leukocyte receptor cluster (LRC) member 1. (276 aa)    
Predicted Functional Partners:
syf2
SYF2 pre-mRNA-splicing factor.
    
 0.835
LOC103368976
Zgc:103697.
    
  0.833
LOC103363335
H2A histone family, member Y; Belongs to the histone H2A family.
   
  0.831
LOC103376442
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
   
  0.831
prpf19
Pre-mRNA processing factor 19.
    
 0.825
nup88
Nucleoporin 88.
    
 0.823
xab2
XPA binding protein 2.
   
 0.822
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
    
 0.822
NUP214
Nucleoporin 214.
    
 0.820
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.820
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.