STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000030159Telomere repeat binding bouquet formation protein 1. (561 aa)    
Predicted Functional Partners:
terf1
Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat.
    
 
 0.961
ENSSPAP00000025784
Telomere repeat binding bouquet formation protein 2.
    
 
 0.949
LOC103371363
SUN domain-containing protein.
    
 
 0.626
LOC103360714
Sad1 and UNC84 domain containing 1.
    
 
 0.582
ENSSPAP00000022826
Uncharacterized protein.
      
 0.576
shoc2
SHOC2 leucine rich repeat scaffold protein.
   
    0.518
terf2
HTH myb-type domain-containing protein.
    
 
 0.511
fam210b
Family with sequence similarity 210 member B.
      
 0.468
ENSSPAP00000003092
Uncharacterized protein.
      
 0.416
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.