STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr33WD repeat domain 33. (273 aa)    
Predicted Functional Partners:
sympk
Symplekin.
    
 0.999
cpsf1
Cleavage and polyadenylation specific factor 1.
   
 0.999
cpsf4
Cleavage and polyadenylation specific factor 4.
   
 0.999
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.999
LOC103353163
FIP1 like 1b (S. cerevisiae).
   
 0.999
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.992
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
   
 0.992
ssu72
SSU72 homolog, RNA polymerase II CTD phosphatase.
    
 0.992
LOC103371396
Cleavage and polyadenylation specific factor 3.
   
 0.992
wdr82
WD repeat domain 82.
   
 0.991
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.