STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
l3mbtl2L3MBTL histone methyl-lysine binding protein 2. (777 aa)    
Predicted Functional Partners:
LOC103358882
YY1 transcription factor.
    
 0.919
YY1
YY1 transcription factor b.
    
 0.912
RING1
Ring finger protein 1.
    
 0.894
rnf2
Ring finger protein 2.
    
 0.894
LOC103370703
THAP-type domain-containing protein.
    
 0.885
LOC103364263
THAP-type domain-containing protein.
    
 0.885
pcgf6
Polycomb group ring finger 6.
    
 0.878
pcgf1
Polycomb group ring finger 1.
    
 0.872
tfdp1
Transcription factor.
   
 0.833
rybp
RING1 and YY1 binding protein b.
    
 0.823
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.