STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctswCathepsin F; Belongs to the peptidase C1 family. (474 aa)    
Predicted Functional Partners:
ctsc
Cathepsin C; Belongs to the peptidase C1 family.
   
0.907
ctso
Cathepsin O; Belongs to the peptidase C1 family.
  
  
 
0.836
cpvl
Carboxypeptidase vitellogenic like; Belongs to the peptidase S10 family.
   
 0.836
LOC103368463
Baculoviral IAP repeat containing 5b.
     
 0.834
birc2
Baculoviral IAP repeat containing 2.
     
 0.834
LOC103374293
Baculoviral IAP repeat containing 5a.
     
 0.834
xiap
X-linked inhibitor of apoptosis.
     
 0.834
bcl2l1
BCL2 like 1.
     
 0.829
LOC103365897
BH4_2 domain-containing protein.
     
 0.829
LOC103364983
Cathepsin Bb; Belongs to the peptidase C1 family.
   
0.825
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.