STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103373299Nucleus accumbens associated 1, BEN and BTB (POZ) domain containing a. (567 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
    
  0.862
bard1
BRCA1 associated RING domain 1.
    
 0.616
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.589
YTHDC2
YTH domain containing 2.
    
  0.579
mrps10
Mitochondrial ribosomal protein S10.
    
 0.570
LOC103354555
Nanog homeobox.
    
 0.565
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.561
ENSSPAP00000014515
Mitochondrial ribosomal protein S2.
   
 0.554
ENSSPAP00000004797
NDK domain-containing protein.
    
 0.553
LOC103374273
POU domain protein.
    
 0.546
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.