STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103371590ANK_REP_REGION domain-containing protein. (1099 aa)    
Predicted Functional Partners:
LOC103358261
Rho family GTPase 1b.
   
 0.698
RND1
Rho family GTPase 1.
   
 0.698
LOC103374578
SPX domain-containing protein.
   
 0.687
xpr1
Xenotropic and polytropic retrovirus receptor 1b.
   
 0.687
pla1a
Phospholipase A1 member A.
    
  0.685
LOC103365419
Uncharacterized protein.
    
 0.681
CRK
CRK proto-oncogene, adaptor protein.
    
 0.681
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.680
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.673
ENSSPAP00000030434
Uncharacterized protein.
    
 0.673
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.