STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfx7Regulatory factor X7b. (1420 aa)    
Predicted Functional Partners:
rfxap
Regulatory factor X-associated protein.
    
 0.868
ENSSPAP00000030409
Uncharacterized protein.
   
 0.865
rfxank
Regulatory factor X-associated ankyrin-containing protein.
    
 0.787
atr
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.779
ankra2
Ankyrin repeat, family A (RFXANK-like), 2.
   
 0.709
LOC103363431
Doublecortin-like kinase 1b.
     
 0.651
LOC103354101
Doublecortin-like kinase 1a.
     
 0.651
tonsl
Tonsoku-like, DNA repair protein.
    
  0.631
dcdc2b
Doublecortin domain containing 2B.
     
 0.511
ENSSPAP00000025289
Si:dkey-25g12.4.
     
 0.511
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.