STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103357623Family with sequence similarity 102 member Ba. (370 aa)    
Predicted Functional Partners:
ENSSPAP00000003713
SEC61 translocon gamma subunit.
   
 0.776
LOC103373706
Inositol polyphosphate phosphatase-like 1b.
     
 0.729
inppl1
Inositol polyphosphate phosphatase-like 1a.
     
 0.729
pi4ka
Phosphatidylinositol 4-kinase, catalytic, alpha b; Belongs to the PI3/PI4-kinase family.
   
 0.675
LOC103373624
Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.
   
 0.675
inpp5e
Inositol polyphosphate-5-phosphatase E.
     
 0.674
LOC103369594
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.638
pi4kb
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
   
 0.638
srpra
SRP receptor subunit alpha.
    
 0.619
ARF6
ADP ribosylation factor 6.
    
 0.610
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.