STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103362103Proline, glutamate and leucine rich protein 1. (1219 aa)    
Predicted Functional Partners:
wdr18
WD repeat domain 18.
   
 0.992
tex10
Testis expressed 10.
   
 0.979
nol9
Nucleolar protein 9.
   
 0.962
crebzf
CREB/ATF bZIP transcription factor.
    
 0.851
las1l
LAS1-like, ribosome biogenesis factor.
    
 0.851
LOC103365428
ULP_PROTEASE domain-containing protein.
    
 0.798
LOC103365476
SUMO specific peptidase 3b.
    
 0.798
senp5
ULP_PROTEASE domain-containing protein.
    
 0.798
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.782
rpl30
Ribosomal protein L30.
    
 0.735
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.