STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cd99l2CD99 molecule-like 2. (246 aa)    
Predicted Functional Partners:
LOC103359804
CD99 molecule.
  
  
0.917
cd34
Si:ch211-286o17.1.
   
  
 0.529
ptgfrn
Si:ch211-132g1.7.
      
 0.524
nab1
NGFI-A binding protein 1a (EGR1 binding protein 1).
      
 0.523
wdr54
WD repeat domain 54.
      
 0.521
LOC103356066
Uncharacterized protein.
     
 0.510
gyg1
Glycogenin 1b.
     
 0.510
gyg2
Glycogenin 2.
     
 0.510
serpinc1
Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family.
   
  
 0.497
asmtl
Acetylserotonin O-methyltransferase-like.
      
 0.482
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.