STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc39a6Solute carrier family 39 member 6. (817 aa)    
Predicted Functional Partners:
slc30a4
Solute carrier family 30 member 4.
   
 0.601
slc30a1
Solute carrier family 30 member 1a.
  
 0.588
slc30a6
Solute carrier family 30 member 6.
  
 0.555
slc1a1
Amino acid transporter.
  
 
 0.533
slc30a7
Solute carrier family 30 member 7.
  
 0.513
sod2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.498
sdr39u1
Short chain dehydrogenase/reductase family 39U, member 1.
  
    0.474
slc30a5
Solute carrier family 30 member 5.
  
 0.454
LOC103362646
Uncharacterized protein.
  
 0.454
LOC103364210
Uncharacterized protein.
  
 0.442
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.