STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
cacna1gVoltage-dependent T-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. This channel gives rise to T-type calcium currents. T-type calcium channels belong to the "low-voltage activated (LVA)" group and are strongly blocked by nickel and mibefradil. A particularity of this type of channels is an opening at quite ne [...] (1921 aa)    
Predicted Functional Partners:
ENSSPAP00000006333
Ion_trans domain-containing protein.
  
  
 
0.879
LOC103368285
Calcium voltage-gated channel subunit alpha1 Ia.
  
  
 
0.878
ENSSPAP00000017177
Ion_trans domain-containing protein.
  
  
 
0.864
LOC103372078
Calcium channel, voltage-dependent, T type, alpha 1H subunit a.
  
  
 
0.863
ENSSPAP00000017229
Ion_trans domain-containing protein.
  
  
 
0.794
LOC103367400
Calcium channel, voltage-dependent, R type, alpha 1E subunit a.
  
0.779
LOC103364108
Calcium channel, voltage-dependent, R type, alpha 1E subunit b.
  
0.779
ENSSPAP00000003297
Uncharacterized protein.
  
0.771
ENSSPAP00000024497
Uncharacterized protein.
   
0.762
LOC103372545
Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents.
   
0.762
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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