STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103360325Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (419 aa)    
Predicted Functional Partners:
pth2
Parathyroid hormone 2.
    
 0.712
crh
Corticotropin releasing hormone b.
    
 0.694
LOC103366129
Parathyroid hormone-like hormone a.
    
 0.694
LOC103366873
Parathyroid hormone-like hormone b.
    
 0.694
ENSSPAP00000027329
CRF domain-containing protein.
    
 0.694
ucn
Urotensin 1.
    
 0.694
LOC103361568
Adenylate cyclase activating polypeptide 1b.
    
 0.690
ADCYAP1
Adenylate cyclase activating polypeptide 1a.
    
 0.690
vip
Vasoactive intestinal peptide.
    
 0.684
ghrh
Growth hormone releasing hormone.
    
 0.684
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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