STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103363157Uncharacterized protein. (197 aa)    
Predicted Functional Partners:
LOC103376298
Uncharacterized protein.
     
 0.837
LOC103374814
Uncharacterized protein.
     
 0.837
csf3r
Colony stimulating factor 3 receptor.
     
 0.837
ENSSPAP00000007583
Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
     
 0.744
ENSSPAP00000021221
Septin-type G domain-containing protein.
     
 0.744
MSS51
MSS51 mitochondrial translational activator.
     
 0.511
smyd3
SET and MYND domain containing 3.
     
 0.511
smyd5
SMYD family member 5.
     
 0.511
smyd1
SET and MYND domain containing 1b.
     
 0.511
smyd4
SET and MYND domain containing 4.
     
 0.511
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.