STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frmd8FERM domain containing 8. (473 aa)    
Predicted Functional Partners:
itgb1bp1
Integrin beta 1 binding protein 1.
    
 
 0.920
LOC103369225
Zgc:162025.
   
    0.675
crybb1
Crystallin, beta B1; Belongs to the beta/gamma-crystallin family.
    
  0.582
rergl
Uncharacterized protein.
    
  0.582
CSDE1
Cold shock domain containing E1, RNA-binding.
    
  0.582
LOC103367178
RAS, dexamethasone-induced 1.
    
  0.582
LOC103373374
RASD family member 3.
    
  0.582
RAP2B
RAP2B, member of RAS oncogene family.
    
  0.582
REM1
RRAD and GEM like GTPase 1.
    
  0.582
ENSSPAP00000004887
Si:dkey-27j5.5.
    
  0.582
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.