STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103360397Zgc:194242. (210 aa)    
Predicted Functional Partners:
sigmar1
Sigma non-opioid intracellular receptor 1.
   
 0.900
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.891
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
    
 0.801
hsd17b7
Hydroxysteroid (17-beta) dehydrogenase 7.
    
 0.801
LOC103368973
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.790
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 0.790
eif2s3
Eukaryotic translation initiation factor 2, subunit 3 gamma.
  
 0.771
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.755
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.738
faxdc2
Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family.
   
 0.736
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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