STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nr4a3Nuclear receptor subfamily 4, group A, member 3. (611 aa)    
Predicted Functional Partners:
ENSSPAP00000024086
BH4_2 domain-containing protein.
   
 0.719
bcl2
BCL2 apoptosis regulator b.
   
 0.719
rxra
Retinoid X receptor, alpha a.
    
0.698
LOC103365718
Uncharacterized protein.
    
0.698
rxrb
Uncharacterized protein.
    
0.698
LOC103368225
Retinoid x receptor, beta b.
    
0.698
LOC103375162
Nuclear receptor subfamily 1, group D, member 2a.
    
0.677
nr1d2
Nuclear receptor subfamily 1, group D, member 2b.
    
0.677
LOC103362045
Nuclear receptor subfamily 1, group D, member 4a.
    
0.677
ncor1
Nuclear receptor corepressor 1.
    
 0.674
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.